WatCon package

Subpackages

• WatCon.tests package
  • Submodules
    • WatCon.tests.test_WatCon module
  • Module contents

Submodules

• WatCon.WatCon module
  • check_conditions()
  • parse_analysis()
  • parse_arguments()
  • parse_inputs()
  • run_watcon()
  • run_watcon_postanalysis()
• WatCon.find_conserved_networks module
  • cluster_coordinates_only()
  • cluster_nodes()
  • collect_coordinates()
  • combine_graphs()
  • create_clustered_network()
  • find_clusters_from_densities()
  • find_commonality()
  • get_coordinates_from_pdb()
  • get_coordinates_from_topology()
  • identify_clustered_angles()
  • identify_conserved_water_clusters()
  • identify_conserved_water_interactions_clustering()
  • plot_commonality()
• WatCon.generate_dynamic_networks module
• WatCon.generate_static_networks module
• WatCon.residue_analysis module
  • classify_waters()
  • get_all_water_distances()
  • get_interaction_counts()
  • get_per_residue_interactions()
  • histogram_metrics()
  • plot_interactions_from_angles()
  • plot_residue_interactions()
• WatCon.sequence_processing module
• WatCon.visualize_structures module
  • export_graph_to_pdb()
  • plot_consevation_angles()
  • project_clusters()
  • pymol_project_oxygen_network()
  • save_xyz()

Module contents

Water network analysis tool for crystal structure and MD simulation data